STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glcPglucose/mannose:H+ symporter. (394 aa)    
Predicted Functional Partners:
manP
Phosphotransferase system (PTS) mannose-specific enzyme IIBCA component.
   
  
 0.740
ntdB
HAD-superfamily hydrolase, subfamily IIB.
  
    0.644
glcU
Hexose transporter GlcU.
     
 0.630
pssA
Phosphatidylserine synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
 0.628
fruP
Putative sugar permease YwbF.
     
 0.615
ntdC
Putative oxidoreductase.
  
    0.589
psd
Phosphatidylserine decarboxylase Psd; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
    
  0.578
ntdA
Putative aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
    0.577
yvpA
Polysaccharide Lyase Family 3; Catalyzes the depolymerization of both polygalacturonate and pectins of methyl esterification degree from 22 to 89%, with an endo mode of action. In contrast to the majority of pectate lyases, displays high activity on highly methylated pectins (By similarity). Belongs to the polysaccharide lyase 3 family.
  
     0.555
ptsG
Phosphotransferase system (PTS) glucose-specific enzyme IICBA component.
   
  
 0.552
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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