STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dhbA2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (256 aa)    
Predicted Functional Partners:
dhbB
Isochorismatase.
 
 
 0.998
dhbF
DhbF.
 
 0.997
dhbE
2,3-dihydroxybenzoate-AMP ligase (enterobactin synthetase component E).
 
 0.996
dhbC
Isochorismate synthase.
 
  
 0.981
yuiI
Triacetone hydrolase.
 
  
 0.965
lchAA
Lichenysin synthetase A.
 
 0.926
BL04025
Conserved hypothetical protein.
 
    0.908
lchAB
Lichenysin synthetase B.
 
 0.905
gltA
Glutamate synthase (large subunit).
     
 0.825
feuA
Iron-binding protein.
 
 
 0.820
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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