Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| fliZ | yaaR | BL01259 | BL05002 | Flagellar protein. | Conserved hypothetical protein YaaR. | 0.653 |
| fliZ | yviE | BL01259 | BL03371 | Flagellar protein. | Conserved protein YviE. | 0.743 |
| fliZ | yvyF | BL01259 | BL03366 | Flagellar protein. | YvyF. | 0.693 |
| fliZ | yvyG | BL01259 | BL03368 | Flagellar protein. | YvyG. | 0.952 |
| holB | yaaO | BL00541 | BL02508 | DNA polymerase III (delta' subunit). | Putative Orn/Lys/Arg decarboxylase, C-terminal YaaO; Probable lysine decarboxylase. | 0.679 |
| holB | yaaQ | BL00541 | BL02510 | DNA polymerase III (delta' subunit). | YaaQ. | 0.830 |
| holB | yaaR | BL00541 | BL05002 | DNA polymerase III (delta' subunit). | Conserved hypothetical protein YaaR. | 0.886 |
| holB | yaaT | BL00541 | BL00539 | DNA polymerase III (delta' subunit). | Putative signal peptidase II YaaT; Involved in the transduction of signals to the phosphorelay for initiation of sporulation, similar to signal peptidase II, contains PSP1_C terminal domain. | 0.842 |
| holB | yabA | BL00541 | BL00538 | DNA polymerase III (delta' subunit). | DnaA and DnaN interacting protein containing domain DUF972- YabA; Involved in initiation control of chromosome replication. Belongs to the YabA family. | 0.856 |
| holB | yabB | BL00541 | BL00537 | DNA polymerase III (delta' subunit). | Conserved hypothetical protein containing SAM (and some other nucleotide) binding motif YabB. | 0.741 |
| yaaO | holB | BL02508 | BL00541 | Putative Orn/Lys/Arg decarboxylase, C-terminal YaaO; Probable lysine decarboxylase. | DNA polymerase III (delta' subunit). | 0.679 |
| yaaO | yaaQ | BL02508 | BL02510 | Putative Orn/Lys/Arg decarboxylase, C-terminal YaaO; Probable lysine decarboxylase. | YaaQ. | 0.663 |
| yaaO | yaaR | BL02508 | BL05002 | Putative Orn/Lys/Arg decarboxylase, C-terminal YaaO; Probable lysine decarboxylase. | Conserved hypothetical protein YaaR. | 0.667 |
| yaaO | yaaT | BL02508 | BL00539 | Putative Orn/Lys/Arg decarboxylase, C-terminal YaaO; Probable lysine decarboxylase. | Putative signal peptidase II YaaT; Involved in the transduction of signals to the phosphorelay for initiation of sporulation, similar to signal peptidase II, contains PSP1_C terminal domain. | 0.630 |
| yaaO | yabA | BL02508 | BL00538 | Putative Orn/Lys/Arg decarboxylase, C-terminal YaaO; Probable lysine decarboxylase. | DnaA and DnaN interacting protein containing domain DUF972- YabA; Involved in initiation control of chromosome replication. Belongs to the YabA family. | 0.581 |
| yaaO | yabB | BL02508 | BL00537 | Putative Orn/Lys/Arg decarboxylase, C-terminal YaaO; Probable lysine decarboxylase. | Conserved hypothetical protein containing SAM (and some other nucleotide) binding motif YabB. | 0.580 |
| yaaQ | holB | BL02510 | BL00541 | YaaQ. | DNA polymerase III (delta' subunit). | 0.830 |
| yaaQ | yaaO | BL02510 | BL02508 | YaaQ. | Putative Orn/Lys/Arg decarboxylase, C-terminal YaaO; Probable lysine decarboxylase. | 0.663 |
| yaaQ | yaaR | BL02510 | BL05002 | YaaQ. | Conserved hypothetical protein YaaR. | 0.858 |
| yaaQ | yaaT | BL02510 | BL00539 | YaaQ. | Putative signal peptidase II YaaT; Involved in the transduction of signals to the phosphorelay for initiation of sporulation, similar to signal peptidase II, contains PSP1_C terminal domain. | 0.812 |
page 1 of 4