STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BL05021Conserved hypothetical protein. (206 aa)    
Predicted Functional Partners:
ycbN
ABC transporter YcbN.
 
   0.918
BL00684
Conserved membrane protein.
  
     0.705
BL02074
Rhodopsin-like GPCR superfamily.
  
     0.659
ywoF
Polysaccharide Lyase Family 9,YwoF.
  
     0.640
yvdC
YvdC.
  
     0.632
ycbO
Conserved hypothetical protein YcbO.
 
    
0.571
yunG
YunG.
  
     0.549
yetN
Conserved hypothetical protein YetN.
       0.531
BL00122
Two-component response regulator; BL00122 similar to lytT from Bacillus subtilis.
  
     0.482
BL02723
ABC transporter,ATP/GTP-binding site motif A (P-loop).
  
   0.477
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.