STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gsiBGeneral stress protein. (146 aa)    
Predicted Functional Partners:
yflT
Conserved hypothetical protein YflT; General stress protein.
  
    0.759
yraE
YraE.
  
     0.634
gspA
Glycosyl Transferase Family 8.
   
  
 0.617
yraD
YraD.
  
     0.595
cotF
Spore coat protein F.
  
     0.582
bmrU
Multidrug resistance protein.
  
   
 0.566
ydbB
Conserved protein YdbB.
       0.566
ydaG
FMN-binding split barrel domain protein YdaG.
  
  
 0.555
ybyB
Conserved hypothetical protein YbyB.
  
    0.510
ydbI
Conserved membrane protein YdbI.
 
     0.503
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.