STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ydiLAldo/keto reductase; Putative membrane-bound metalloprotease. (244 aa)    
Predicted Functional Partners:
ydiK
YdiK.
  
    0.859
lytD
N-acetylglucosaminidase (major autolysin), Glycoside Hydrolase Family 73.
  
 
   0.734
yjbH
Conserved protein YjbH; Belongs to the UPF0413 family.
  
     0.686
yjbF
Conserved protein YjbF.
  
     0.644
ytmP
YtmP.
  
     0.624
BL02837
Hypothetical protein; Molecular Function: carboxypeptidase A activity, Biological Process: proteolysis and peptidolysis.
  
  
 0.597
BL02838
Conserved hypothetical protein.
  
  
 0.597
ytxK
Putative RNA methylase YtxK.
 
     0.593
ysoA
Conserved protein YsoA.
  
     0.581
ytpQ
Conserved protein YtpQ; Belongs to the UPF0354 family.
  
     0.566
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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