STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssuDAliphatic sulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family. (376 aa)    
Predicted Functional Partners:
ssuA
Aliphatic sulfonate ABC transporter (binding lipoprotein).
 
 
 0.981
ssuC
Aliphatic sulfonate ABC transporter (permease).
 
 0.979
dhbF
DhbF.
 
 
 0.949
ssuB
Aliphatic sulfonate ABC transporter (binding protein); Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 
 
 0.927
lchAB
Lichenysin synthetase B.
 
 
 0.807
lchAA
Lichenysin synthetase A.
 
 
 0.780
azr
Putative NADPH-dependent FMN reductase YhdA.
  
 0.775
lchAC
Lichenysin synthetase C.
 
 
 0.766
ytlD
Putative sulfonate transport system permease protein YtlD.
 
 
 0.758
yrkH
Conserved protein YrkH.
   
 
 0.729
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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