STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BL05090Hypothetical protein. (74 aa)    
Predicted Functional Partners:
seaA
Hypothetical protein; Involved in spore envelope assembly.
  
     0.687
ylaJ
Hypothetical protein.
  
     0.598
cotJB
CotJB.
  
     0.577
yitG
Putative transporter.
  
     0.470
gerPA
Spore germination protein.
  
     0.466
BL02834
Small acid-soluble spore protein (beta-type).
       0.466
BL01391
Spore germination B3 GerAC like protein.
  
     0.465
BL01378
Hypothetical protein.
  
     0.451
ylxX
Hypothetical protein.
  
     0.451
BL00543
Hypothetical protein.
  
     0.443
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.