STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BL05118Hypothetical protein. (86 aa)    
Predicted Functional Partners:
xkdC
Phage related protein.
       0.773
xkdB
Phage related protein.
       0.773
BL03836
Hypothetical protein.
       0.773
BL07019
Hypothetical protein; BLi01323.
       0.773
cinA
Competence-damage inducible protein; Belongs to the CinA family.
    
 0.761
xtrA
Phage related protein.
       0.524
xkdD
Phage related protein.
       0.524
sinI
Antagonist of SinR.
    
   0.516
spo0F
Two-component response regulator.
    
  0.514
xre
Transcriptional regulator.
       0.513
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.