Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BL05135 | clpQ | BL05135 | BL01278 | Hypothetical Lambda integrase-like, N-terminal,DNA breaking-rejoining enzyme, catalytic core; Belongs to the 'phage' integrase family. | Two-component ATP-dependent protease (N-terminal serine protease); Protease subunit of a proteasome-like degradation complex. | 0.661 |
| BL05135 | comFC | BL05135 | BL03365 | Hypothetical Lambda integrase-like, N-terminal,DNA breaking-rejoining enzyme, catalytic core; Belongs to the 'phage' integrase family. | Competence protein. | 0.616 |
| BL05135 | noc | BL05135 | BL00107 | Hypothetical Lambda integrase-like, N-terminal,DNA breaking-rejoining enzyme, catalytic core; Belongs to the 'phage' integrase family. | Putative DNA binding partioning protein; Effects nucleoid occlusion by binding relatively nonspecifically to DNA and preventing the assembly of the division machinery in the vicinity of the nucleoid, especially under conditions that disturb the cell cycle. It helps to coordinate cell division and chromosome segregation by preventing the formation of the Z ring through the nucleoid, which would cause chromosome breakage. Belongs to the ParB family. | 0.527 |
| BL05135 | soj | BL05135 | BL00104 | Hypothetical Lambda integrase-like, N-terminal,DNA breaking-rejoining enzyme, catalytic core; Belongs to the 'phage' integrase family. | Chromosome partitioning protein transcriptional regulator. | 0.548 |
| BL05135 | spo0J | BL05135 | BL00103 | Hypothetical Lambda integrase-like, N-terminal,DNA breaking-rejoining enzyme, catalytic core; Belongs to the 'phage' integrase family. | Stage 0 sporulation protein J; Belongs to the ParB family. | 0.563 |
| BL05135 | spoIIIE | BL05135 | BL01204 | Hypothetical Lambda integrase-like, N-terminal,DNA breaking-rejoining enzyme, catalytic core; Belongs to the 'phage' integrase family. | DNA translocase SpoIIIE; Belongs to the FtsK/SpoIIIE/SftA family. | 0.597 |
| BL05135 | tyrA | BL05135 | BL02768 | Hypothetical Lambda integrase-like, N-terminal,DNA breaking-rejoining enzyme, catalytic core; Belongs to the 'phage' integrase family. | Prephenate dehydrogenase. | 0.475 |
| BL05135 | yoqW | BL05135 | BL01064 | Hypothetical Lambda integrase-like, N-terminal,DNA breaking-rejoining enzyme, catalytic core; Belongs to the 'phage' integrase family. | YoqW; Belongs to the SOS response-associated peptidase family. | 0.461 |
| BL05135 | ytpT | BL05135 | BL00049 | Hypothetical Lambda integrase-like, N-terminal,DNA breaking-rejoining enzyme, catalytic core; Belongs to the 'phage' integrase family. | YtpT; Belongs to the FtsK/SpoIIIE/SftA family. | 0.639 |
| BL05135 | yvcL | BL05135 | BL03420 | Hypothetical Lambda integrase-like, N-terminal,DNA breaking-rejoining enzyme, catalytic core; Belongs to the 'phage' integrase family. | Conserved protein YvcL; Involved in cell division and chromosome segregation. | 0.461 |
| clpQ | BL05135 | BL01278 | BL05135 | Two-component ATP-dependent protease (N-terminal serine protease); Protease subunit of a proteasome-like degradation complex. | Hypothetical Lambda integrase-like, N-terminal,DNA breaking-rejoining enzyme, catalytic core; Belongs to the 'phage' integrase family. | 0.661 |
| comFC | BL05135 | BL03365 | BL05135 | Competence protein. | Hypothetical Lambda integrase-like, N-terminal,DNA breaking-rejoining enzyme, catalytic core; Belongs to the 'phage' integrase family. | 0.616 |
| comFC | tyrA | BL03365 | BL02768 | Competence protein. | Prephenate dehydrogenase. | 0.747 |
| noc | BL05135 | BL00107 | BL05135 | Putative DNA binding partioning protein; Effects nucleoid occlusion by binding relatively nonspecifically to DNA and preventing the assembly of the division machinery in the vicinity of the nucleoid, especially under conditions that disturb the cell cycle. It helps to coordinate cell division and chromosome segregation by preventing the formation of the Z ring through the nucleoid, which would cause chromosome breakage. Belongs to the ParB family. | Hypothetical Lambda integrase-like, N-terminal,DNA breaking-rejoining enzyme, catalytic core; Belongs to the 'phage' integrase family. | 0.527 |
| noc | soj | BL00107 | BL00104 | Putative DNA binding partioning protein; Effects nucleoid occlusion by binding relatively nonspecifically to DNA and preventing the assembly of the division machinery in the vicinity of the nucleoid, especially under conditions that disturb the cell cycle. It helps to coordinate cell division and chromosome segregation by preventing the formation of the Z ring through the nucleoid, which would cause chromosome breakage. Belongs to the ParB family. | Chromosome partitioning protein transcriptional regulator. | 0.979 |
| noc | spo0J | BL00107 | BL00103 | Putative DNA binding partioning protein; Effects nucleoid occlusion by binding relatively nonspecifically to DNA and preventing the assembly of the division machinery in the vicinity of the nucleoid, especially under conditions that disturb the cell cycle. It helps to coordinate cell division and chromosome segregation by preventing the formation of the Z ring through the nucleoid, which would cause chromosome breakage. Belongs to the ParB family. | Stage 0 sporulation protein J; Belongs to the ParB family. | 0.843 |
| noc | spoIIIE | BL00107 | BL01204 | Putative DNA binding partioning protein; Effects nucleoid occlusion by binding relatively nonspecifically to DNA and preventing the assembly of the division machinery in the vicinity of the nucleoid, especially under conditions that disturb the cell cycle. It helps to coordinate cell division and chromosome segregation by preventing the formation of the Z ring through the nucleoid, which would cause chromosome breakage. Belongs to the ParB family. | DNA translocase SpoIIIE; Belongs to the FtsK/SpoIIIE/SftA family. | 0.745 |
| noc | ytpT | BL00107 | BL00049 | Putative DNA binding partioning protein; Effects nucleoid occlusion by binding relatively nonspecifically to DNA and preventing the assembly of the division machinery in the vicinity of the nucleoid, especially under conditions that disturb the cell cycle. It helps to coordinate cell division and chromosome segregation by preventing the formation of the Z ring through the nucleoid, which would cause chromosome breakage. Belongs to the ParB family. | YtpT; Belongs to the FtsK/SpoIIIE/SftA family. | 0.742 |
| soj | BL05135 | BL00104 | BL05135 | Chromosome partitioning protein transcriptional regulator. | Hypothetical Lambda integrase-like, N-terminal,DNA breaking-rejoining enzyme, catalytic core; Belongs to the 'phage' integrase family. | 0.548 |
| soj | noc | BL00104 | BL00107 | Chromosome partitioning protein transcriptional regulator. | Putative DNA binding partioning protein; Effects nucleoid occlusion by binding relatively nonspecifically to DNA and preventing the assembly of the division machinery in the vicinity of the nucleoid, especially under conditions that disturb the cell cycle. It helps to coordinate cell division and chromosome segregation by preventing the formation of the Z ring through the nucleoid, which would cause chromosome breakage. Belongs to the ParB family. | 0.979 |
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