STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ykzIHypothetical protein. (62 aa)    
Predicted Functional Partners:
ysxE
Conserved protein YsxE.
  
     0.655
suhB
Inositol monophosphatase SuhB.
       0.648
yktB
Hypothetical protein; Belongs to the UPF0637 family.
       0.632
ylbE
Hypothetical protein.
  
     0.619
yutH
Conserved protein YutH.
  
     0.614
ybyB
Conserved hypothetical protein YbyB.
   
    0.611
yfhS
Conserved protein YhfS.
  
     0.595
ybaK
Conserved hypothetical protein YbaK.
  
     0.588
yqhP
Conserved membrane protein YqhP.
  
     0.581
yufK
Hypothetical protein.
  
     0.573
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.