STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ylbFYlbF; Belongs to the UPF0342 family. (149 aa)    
Predicted Functional Partners:
ymcA
Conserved hypothetical protein; Belongs to the UPF0342 family.
  
 
 
 0.990
yaaT
Putative signal peptidase II YaaT; Involved in the transduction of signals to the phosphorelay for initiation of sporulation, similar to signal peptidase II, contains PSP1_C terminal domain.
 
   
 0.912
ylbG
Conserved hypothetical protein.
 
    0.838
ylaN
YlaN; Belongs to the UPF0358 family.
 
     0.795
ytpQ
Conserved protein YtpQ; Belongs to the UPF0354 family.
  
     0.659
fer
Ferredoxin.
  
     0.654
yutD
Conserved protein YutD.
  
     0.615
yuzB
Conserved protein YuzB; Belongs to the UPF0349 family.
  
     0.604
yfhP
Predicted membrane-bound metal-dependent hydrolase; Negative regulator of yfhQ, fabL, sspE and yfhP.
  
     0.587
ecsB
ABC transporter (membrane protein).
  
   
 0.586
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.