STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sspOSmall acid-soluble spore protein; Belongs to the SspO family. (48 aa)    
Predicted Functional Partners:
sspP
Small acid-soluble spore protein; Belongs to the SspP family.
  
  
 0.980
tlp
Small acid-soluble spore protein (thioredoxin-like protein); Belongs to the Tlp family.
  
  
 0.881
sspN
Small acid-soluble spore protein; Belongs to the SspN family.
  
  
 0.778
sspJ
Hypothetical protein; BLi03524.
   
  
 0.772
sspK
Small acid-soluble spore protein; Belongs to the SspK family.
   
  
 0.738
sspI
Small acid-soluble spore protein; Belongs to the SspI family.
   
  
 0.711
citB
Aconitate hydratase (aconitase); Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
       0.638
yneN
Putative thiol:disulfide interchange protein YneN.
       0.529
sspF
Small acid-soluble spore protein (alpha/beta-type SASP).
   
  
 0.507
ytzC
Conserved protein YtzC.
   
    0.489
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.