STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ahpCAAlkyl hydroperoxide reductase large subunit. (305 aa)    
Predicted Functional Partners:
trxA
Thioredoxin; Belongs to the thioredoxin family.
  
 
 0.832
BL01497
SAM dependent methyltranferase.
 
     0.660
ywgB
Putative transcriptional regulator.
 
     0.653
ahpC
Alkyl hydroperoxide reductase (small subunit); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
  
 
 0.571
ykuU
Alkyl hydroperoxide reductase.
  
 
 0.571
ytpP
Putative thioredoxin YtpP.
   
 
 0.451
ysoA
Conserved protein YsoA.
  
   0.435
BL02056
Cytochrome c heme-binding site.
  
   0.435
ydbP
Putative thiredoxin protein YdpP; Similar to thioredoxin.
  
   0.435
stoA
Thioredoxin type domain, electron transporter protein.
  
   0.435
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.