STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
yphPConserved hypothetical protein; Belongs to the UPF0403 family. (144 aa)    
Predicted Functional Partners:
BL02225
FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
  
  
 0.897
ytxJ
YtxJ.
  
   
 0.893
yllA
Conserved hypothetical protein; Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH.
  
   
 0.851
BL02755
Glycosyl transferase, Family 4.
  
   
 0.835
BL02756
Putative carbohydrate esterase Family 14.
  
   
 0.716
ohrR
Repressor of ohrA - OhrR.
      
 0.696
ilvD
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
       0.687
ypiP
Conserved hypothetical protein.
       0.631
yojG
Conserved protein, Carbohydrate Esterase Family 14.
  
  
 0.630
ypgR
Rhodopsin-like GPCR superfamily protein.
 
     0.597
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.