STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ypsAConserved hypothetical protein YpsA; Belongs to the UPF0398 family. (183 aa)    
Predicted Functional Partners:
ypsB
Conserved hypothetical protein YpsB; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation.
 
   
 0.684
ydcK
Conserved protein YdcK; Belongs to the SprT family.
  
     0.586
cotD
Spore coat protein (inner).
       0.574
ypiA
TPR-repeat containing conserved hypothetical protein.
  
     0.571
ytxK
Putative RNA methylase YtxK.
  
     0.545
yfnI
Putative sulfatase; Belongs to the LTA synthase family.
  
     0.520
yflE
Sulfatase YflE; Belongs to the LTA synthase family.
  
     0.492
yslB
Conserved protein YslB.
  
     0.489
ecsB
ABC transporter (membrane protein).
  
     0.455
BL02233
Bipartite response regulator, C-terminal effector.
  
     0.423
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.