STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ytkAConserved protein YtkA. (147 aa)    
Predicted Functional Partners:
resB
ResB.
  
    0.813
kbaA
kinB signaling pathway activation protein KbaA; Involved in the activation of the KinB signaling pathway of sporulation.
  
     0.769
ylbA
Hypothetical protein.
  
     0.768
cccA
Cytochrome c550.
 
    0.768
resC
ResC.
  
    0.767
ctaF
Cytochrome caa3 oxidase (subunit IV).
  
     0.765
yuiB
Conserved membrane protein YuiB.
  
     0.765
ygzB
Hypothetical protein.
  
     0.765
yqgY
Conserved protein YqgY.
  
     0.764
yqzF
Conserved protein YqzF.
  
     0.763
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.