STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BL05311Hypothetical protein. (53 aa)    
Predicted Functional Partners:
BL05285
Hypothetical protein.
   
  
 0.929
BL02402
Hypothetical protein.
       0.776
BL02035
Hypothetical protein.
   
    0.753
ythB
Conserved hypothetical protein YthB.
 
     0.745
BL05134
Conserved hypothetical protein.
   
    0.619
ythA
Cytochrome bd ubiquinol oxidase, subunit I.
       0.557
sspE
Small acid-soluble spore protein (gamma-type SASP).
  
    0.547
sspH
Small acid-soluble spore protein; Belongs to the SspH family.
  
    0.478
yqkB
Conserved protein YqkB; Belongs to the HesB/IscA family.
  
     0.467
sspN
Small acid-soluble spore protein; Belongs to the SspN family.
   
    0.458
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.