Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
citA | citZ | BL02891 | BL00399 | Citrate synthase I; Belongs to the citrate synthase family. | Citrate synthase II; Belongs to the citrate synthase family. | 0.593 |
citA | gltA | BL02891 | BL01971 | Citrate synthase I; Belongs to the citrate synthase family. | Glutamate synthase (large subunit). | 0.851 |
citA | icd | BL02891 | BL00398 | Citrate synthase I; Belongs to the citrate synthase family. | Isocitrate dehydrogenase. | 0.900 |
citA | ldh | BL02891 | BL01703 | Citrate synthase I; Belongs to the citrate synthase family. | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | 0.858 |
citA | mmgD | BL02891 | BL00561 | Citrate synthase I; Belongs to the citrate synthase family. | Citrate synthase III; Belongs to the citrate synthase family. | 0.632 |
citA | pyk | BL02891 | BL00402 | Citrate synthase I; Belongs to the citrate synthase family. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.506 |
citA | sdhA | BL02891 | BL00322 | Citrate synthase I; Belongs to the citrate synthase family. | Succinate dehydrogenase (flavoprotein subunit). | 0.855 |
citA | sdhB | BL02891 | BL00320 | Citrate synthase I; Belongs to the citrate synthase family. | Succinate dehydrogenase (iron-sulfur protein). | 0.903 |
citZ | citA | BL00399 | BL02891 | Citrate synthase II; Belongs to the citrate synthase family. | Citrate synthase I; Belongs to the citrate synthase family. | 0.593 |
citZ | gltA | BL00399 | BL01971 | Citrate synthase II; Belongs to the citrate synthase family. | Glutamate synthase (large subunit). | 0.851 |
citZ | icd | BL00399 | BL00398 | Citrate synthase II; Belongs to the citrate synthase family. | Isocitrate dehydrogenase. | 0.953 |
citZ | ldh | BL00399 | BL01703 | Citrate synthase II; Belongs to the citrate synthase family. | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | 0.854 |
citZ | mmgD | BL00399 | BL00561 | Citrate synthase II; Belongs to the citrate synthase family. | Citrate synthase III; Belongs to the citrate synthase family. | 0.585 |
citZ | pyk | BL00399 | BL00402 | Citrate synthase II; Belongs to the citrate synthase family. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.570 |
citZ | sdhA | BL00399 | BL00322 | Citrate synthase II; Belongs to the citrate synthase family. | Succinate dehydrogenase (flavoprotein subunit). | 0.889 |
citZ | sdhB | BL00399 | BL00320 | Citrate synthase II; Belongs to the citrate synthase family. | Succinate dehydrogenase (iron-sulfur protein). | 0.916 |
gltA | citA | BL01971 | BL02891 | Glutamate synthase (large subunit). | Citrate synthase I; Belongs to the citrate synthase family. | 0.851 |
gltA | citZ | BL01971 | BL00399 | Glutamate synthase (large subunit). | Citrate synthase II; Belongs to the citrate synthase family. | 0.851 |
gltA | icd | BL01971 | BL00398 | Glutamate synthase (large subunit). | Isocitrate dehydrogenase. | 0.883 |
gltA | ldh | BL01971 | BL01703 | Glutamate synthase (large subunit). | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | 0.849 |
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