Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
acpA | dhbF | BL02316 | BL04024 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | DhbF. | 0.980 |
acpA | dltB | BL02316 | BL03933 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | DltB; Could be involved in the transport of activated D-alanine through the membrane. | 0.906 |
acpA | fabD | BL02316 | BL02314 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | Malonyl CoA-acyl carrier protein transacylase. | 0.990 |
acpA | fabF | BL02316 | BL03314 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | Beta-ketoacyl-acyl carrier protein synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.953 |
acpA | fabI | BL02316 | BL05113 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | Enoyl-acyl carrier protein reductase. | 0.893 |
acpA | fabZ | BL02316 | BL02496 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. | 0.934 |
acpA | lchAA | BL02316 | BL01726 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | Lichenysin synthetase A. | 0.963 |
acpA | lchAB | BL02316 | BL01727 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | Lichenysin synthetase B. | 0.978 |
acpA | lchAC | BL02316 | BL01728 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | Lichenysin synthetase C. | 0.976 |
acpA | rplU | BL02316 | BL04043 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | Ribosomal protein L21 (BL20); This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.913 |
dhbF | acpA | BL04024 | BL02316 | DhbF. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. | 0.980 |
dhbF | dltB | BL04024 | BL03933 | DhbF. | DltB; Could be involved in the transport of activated D-alanine through the membrane. | 0.996 |
dhbF | fabD | BL04024 | BL02314 | DhbF. | Malonyl CoA-acyl carrier protein transacylase. | 0.993 |
dhbF | fabF | BL04024 | BL03314 | DhbF. | Beta-ketoacyl-acyl carrier protein synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.987 |
dhbF | fabI | BL04024 | BL05113 | DhbF. | Enoyl-acyl carrier protein reductase. | 0.953 |
dhbF | fabZ | BL04024 | BL02496 | DhbF. | Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. | 0.906 |
dhbF | lchAA | BL04024 | BL01726 | DhbF. | Lichenysin synthetase A. | 0.999 |
dhbF | lchAB | BL04024 | BL01727 | DhbF. | Lichenysin synthetase B. | 0.999 |
dhbF | lchAC | BL04024 | BL01728 | DhbF. | Lichenysin synthetase C. | 0.999 |
dhbF | rplU | BL04024 | BL04043 | DhbF. | Ribosomal protein L21 (BL20); This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.919 |
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