Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BL00058 | bcrC | BL00058 | BL02453 | Ribosomal protein S2. | Acid phosphatase/vanadium-dependent haloperoxidase. | 0.631 |
BL00058 | dgkA | BL00058 | BL03672 | Ribosomal protein S2. | Diacylglycerol kinase. | 0.588 |
BL00058 | mraY | BL00058 | BL02240 | Ribosomal protein S2. | phospho-N-acetylmuramoyl-pentapeptide transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.550 |
BL00058 | upkA | BL00058 | BL03255 | Ribosomal protein S2. | Probable undecaprenol kinase UpkA; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.587 |
BL00058 | uppS | BL00058 | BL01239 | Ribosomal protein S2. | Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.577 |
BL00058 | yodM | BL00058 | BL01435 | Ribosomal protein S2. | Putative acid phosphatase. | 0.646 |
BL00058 | yubB | BL00058 | BL02576 | Ribosomal protein S2. | Probable undecaprenol kinase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.587 |
BL07053 | yubA | BL07053 | BL02577 | Hypothetical protein; BLi03292. | Hypothetical protein. | 0.701 |
BL07053 | yubB | BL07053 | BL02576 | Hypothetical protein; BLi03292. | Probable undecaprenol kinase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.513 |
bcrC | BL00058 | BL02453 | BL00058 | Acid phosphatase/vanadium-dependent haloperoxidase. | Ribosomal protein S2. | 0.631 |
bcrC | comQ | BL02453 | BL02608 | Acid phosphatase/vanadium-dependent haloperoxidase. | Transcriptional regulator; Belongs to the FPP/GGPP synthase family. | 0.544 |
bcrC | dgkA | BL02453 | BL03672 | Acid phosphatase/vanadium-dependent haloperoxidase. | Diacylglycerol kinase. | 0.588 |
bcrC | mraY | BL02453 | BL02240 | Acid phosphatase/vanadium-dependent haloperoxidase. | phospho-N-acetylmuramoyl-pentapeptide transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.773 |
bcrC | upkA | BL02453 | BL03255 | Acid phosphatase/vanadium-dependent haloperoxidase. | Probable undecaprenol kinase UpkA; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.538 |
bcrC | uppS | BL02453 | BL01239 | Acid phosphatase/vanadium-dependent haloperoxidase. | Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.878 |
bcrC | yodM | BL02453 | BL01435 | Acid phosphatase/vanadium-dependent haloperoxidase. | Putative acid phosphatase. | 0.630 |
bcrC | yubB | BL02453 | BL02576 | Acid phosphatase/vanadium-dependent haloperoxidase. | Probable undecaprenol kinase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.634 |
comQ | bcrC | BL02608 | BL02453 | Transcriptional regulator; Belongs to the FPP/GGPP synthase family. | Acid phosphatase/vanadium-dependent haloperoxidase. | 0.544 |
comQ | upkA | BL02608 | BL03255 | Transcriptional regulator; Belongs to the FPP/GGPP synthase family. | Probable undecaprenol kinase UpkA; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.509 |
comQ | uppS | BL02608 | BL01239 | Transcriptional regulator; Belongs to the FPP/GGPP synthase family. | Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.632 |
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