Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LT85_0972 | LT85_2205 | LT85_0972 | LT85_2205 | Channel-forming transporter/cytolysins activator of TpsB family. | Sigma-fimbriae chaperone protein. | 0.458 |
LT85_0972 | LT85_2490 | LT85_0972 | LT85_2490 | Channel-forming transporter/cytolysins activator of TpsB family. | Chaperone protein fimC precursor. | 0.573 |
LT85_0972 | LT85_2491 | LT85_0972 | LT85_2491 | Channel-forming transporter/cytolysins activator of TpsB family. | Outer membrane usher protein. | 0.730 |
LT85_0972 | LT85_2492 | LT85_0972 | LT85_2492 | Channel-forming transporter/cytolysins activator of TpsB family. | F17G adhesin subunit. | 0.469 |
LT85_0972 | LT85_3164 | LT85_0972 | LT85_3164 | Channel-forming transporter/cytolysins activator of TpsB family. | Chaperone protein fimC precursor. | 0.561 |
LT85_2205 | LT85_0972 | LT85_2205 | LT85_0972 | Sigma-fimbriae chaperone protein. | Channel-forming transporter/cytolysins activator of TpsB family. | 0.458 |
LT85_2205 | LT85_2491 | LT85_2205 | LT85_2491 | Sigma-fimbriae chaperone protein. | Outer membrane usher protein. | 0.809 |
LT85_2205 | LT85_2492 | LT85_2205 | LT85_2492 | Sigma-fimbriae chaperone protein. | F17G adhesin subunit. | 0.699 |
LT85_2205 | LT85_2912 | LT85_2205 | LT85_2912 | Sigma-fimbriae chaperone protein. | Channel-forming transporter/cytolysins activator of TpsB family. | 0.458 |
LT85_2490 | LT85_0972 | LT85_2490 | LT85_0972 | Chaperone protein fimC precursor. | Channel-forming transporter/cytolysins activator of TpsB family. | 0.573 |
LT85_2490 | LT85_2491 | LT85_2490 | LT85_2491 | Chaperone protein fimC precursor. | Outer membrane usher protein. | 0.948 |
LT85_2490 | LT85_2492 | LT85_2490 | LT85_2492 | Chaperone protein fimC precursor. | F17G adhesin subunit. | 0.699 |
LT85_2490 | LT85_2912 | LT85_2490 | LT85_2912 | Chaperone protein fimC precursor. | Channel-forming transporter/cytolysins activator of TpsB family. | 0.578 |
LT85_2491 | LT85_0972 | LT85_2491 | LT85_0972 | Outer membrane usher protein. | Channel-forming transporter/cytolysins activator of TpsB family. | 0.730 |
LT85_2491 | LT85_2205 | LT85_2491 | LT85_2205 | Outer membrane usher protein. | Sigma-fimbriae chaperone protein. | 0.809 |
LT85_2491 | LT85_2490 | LT85_2491 | LT85_2490 | Outer membrane usher protein. | Chaperone protein fimC precursor. | 0.948 |
LT85_2491 | LT85_2492 | LT85_2491 | LT85_2492 | Outer membrane usher protein. | F17G adhesin subunit. | 0.862 |
LT85_2491 | LT85_2912 | LT85_2491 | LT85_2912 | Outer membrane usher protein. | Channel-forming transporter/cytolysins activator of TpsB family. | 0.733 |
LT85_2491 | LT85_3164 | LT85_2491 | LT85_3164 | Outer membrane usher protein. | Chaperone protein fimC precursor. | 0.948 |
LT85_2492 | LT85_0972 | LT85_2492 | LT85_0972 | F17G adhesin subunit. | Channel-forming transporter/cytolysins activator of TpsB family. | 0.469 |
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