Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LT85_1152 | LT85_2353 | LT85_1152 | LT85_2353 | Sensory box histidine kinase/response regulator. | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.516 |
LT85_1152 | LT85_2886 | LT85_1152 | LT85_2886 | Sensory box histidine kinase/response regulator. | Exopolyphosphatase. | 0.496 |
LT85_1152 | LT85_3121 | LT85_1152 | LT85_3121 | Sensory box histidine kinase/response regulator. | GTP pyrophosphokinase (p)ppGpp synthetase I; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.516 |
LT85_1152 | guaB | LT85_1152 | LT85_3404 | Sensory box histidine kinase/response regulator. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.519 |
LT85_1152 | phoU | LT85_1152 | LT85_2087 | Sensory box histidine kinase/response regulator. | Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake. | 0.450 |
LT85_1152 | polA | LT85_1152 | LT85_0798 | Sensory box histidine kinase/response regulator. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.582 |
LT85_2353 | LT85_1152 | LT85_2353 | LT85_1152 | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | Sensory box histidine kinase/response regulator. | 0.516 |
LT85_2353 | LT85_2886 | LT85_2353 | LT85_2886 | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | Exopolyphosphatase. | 0.917 |
LT85_2353 | LT85_3121 | LT85_2353 | LT85_3121 | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | GTP pyrophosphokinase (p)ppGpp synthetase I; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.919 |
LT85_2353 | polA | LT85_2353 | LT85_0798 | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.574 |
LT85_2886 | LT85_1152 | LT85_2886 | LT85_1152 | Exopolyphosphatase. | Sensory box histidine kinase/response regulator. | 0.496 |
LT85_2886 | LT85_2353 | LT85_2886 | LT85_2353 | Exopolyphosphatase. | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.917 |
LT85_2886 | LT85_3121 | LT85_2886 | LT85_3121 | Exopolyphosphatase. | GTP pyrophosphokinase (p)ppGpp synthetase I; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.917 |
LT85_2886 | LT85_4945 | LT85_2886 | LT85_4945 | Exopolyphosphatase. | UDP-galactose-lipid carrier transferase. | 0.731 |
LT85_2886 | guaB | LT85_2886 | LT85_3404 | Exopolyphosphatase. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.491 |
LT85_2886 | metG | LT85_2886 | LT85_3996 | Exopolyphosphatase. | Methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.574 |
LT85_2886 | phoU | LT85_2886 | LT85_2087 | Exopolyphosphatase. | Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake. | 0.457 |
LT85_2886 | polA | LT85_2886 | LT85_0798 | Exopolyphosphatase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.462 |
LT85_2886 | ppk | LT85_2886 | LT85_2082 | Exopolyphosphatase. | Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. | 0.902 |
LT85_2886 | ppk-2 | LT85_2886 | LT85_3486 | Exopolyphosphatase. | Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. | 0.898 |
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