Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LT85_2637 | LT85_2645 | LT85_2637 | LT85_2645 | Exopolysaccharide production protein Pss. | Polysaccharide export lipoprotein Wza. | 0.944 |
LT85_2637 | LT85_2942 | LT85_2637 | LT85_2942 | Exopolysaccharide production protein Pss. | Tyrosine-protein kinase Wzc. | 0.919 |
LT85_2637 | LT85_2943 | LT85_2637 | LT85_2943 | Exopolysaccharide production protein Pss. | Tyrosine-protein kinase Wzc. | 0.856 |
LT85_2637 | LT85_2947 | LT85_2637 | LT85_2947 | Exopolysaccharide production protein Pss. | Capsular polysaccharide biosynthesis protein. | 0.857 |
LT85_2637 | LT85_4261 | LT85_2637 | LT85_4261 | Exopolysaccharide production protein Pss. | Polysaccharide export lipoprotein Wza. | 0.946 |
LT85_2637 | gumE | LT85_2637 | LT85_2941 | Exopolysaccharide production protein Pss. | Xanthan biosynthesis exopolysaccharide polymerase GumE. | 0.409 |
LT85_2637 | gumH | LT85_2637 | LT85_2940 | Exopolysaccharide production protein Pss. | Xanthan biosynthesis glycosyltransferase GumH. | 0.653 |
LT85_2637 | wcbA | LT85_2637 | LT85_2944 | Exopolysaccharide production protein Pss. | Capsular polysaccharide biosynthesis/export periplasmic protein WcbA; Capsular polysaccharide export system protein KpsC. | 0.965 |
LT85_2645 | LT85_2637 | LT85_2645 | LT85_2637 | Polysaccharide export lipoprotein Wza. | Exopolysaccharide production protein Pss. | 0.944 |
LT85_2645 | LT85_2942 | LT85_2645 | LT85_2942 | Polysaccharide export lipoprotein Wza. | Tyrosine-protein kinase Wzc. | 0.709 |
LT85_2645 | LT85_2943 | LT85_2645 | LT85_2943 | Polysaccharide export lipoprotein Wza. | Tyrosine-protein kinase Wzc. | 0.700 |
LT85_2645 | LT85_2947 | LT85_2645 | LT85_2947 | Polysaccharide export lipoprotein Wza. | Capsular polysaccharide biosynthesis protein. | 0.941 |
LT85_2645 | LT85_4261 | LT85_2645 | LT85_4261 | Polysaccharide export lipoprotein Wza. | Polysaccharide export lipoprotein Wza. | 0.907 |
LT85_2645 | wcbA | LT85_2645 | LT85_2944 | Polysaccharide export lipoprotein Wza. | Capsular polysaccharide biosynthesis/export periplasmic protein WcbA; Capsular polysaccharide export system protein KpsC. | 0.913 |
LT85_2942 | LT85_2637 | LT85_2942 | LT85_2637 | Tyrosine-protein kinase Wzc. | Exopolysaccharide production protein Pss. | 0.919 |
LT85_2942 | LT85_2645 | LT85_2942 | LT85_2645 | Tyrosine-protein kinase Wzc. | Polysaccharide export lipoprotein Wza. | 0.709 |
LT85_2942 | LT85_2943 | LT85_2942 | LT85_2943 | Tyrosine-protein kinase Wzc. | Tyrosine-protein kinase Wzc. | 0.963 |
LT85_2942 | LT85_2945 | LT85_2942 | LT85_2945 | Tyrosine-protein kinase Wzc. | PPIC-type PPIASE domain protein. | 0.828 |
LT85_2942 | LT85_2947 | LT85_2942 | LT85_2947 | Tyrosine-protein kinase Wzc. | Capsular polysaccharide biosynthesis protein. | 0.944 |
LT85_2942 | LT85_2948 | LT85_2942 | LT85_2948 | Tyrosine-protein kinase Wzc. | Hypothetical protein. | 0.767 |
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