Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LT85_3027 | LT85_3029 | LT85_3027 | LT85_3029 | Transcriptional regulator of various polyols utilization; AraC family. | Xylitol dehydrogenase. | 0.705 |
LT85_3027 | LT85_3030 | LT85_3027 | LT85_3030 | Transcriptional regulator of various polyols utilization; AraC family. | Various polyols ABC transporter; Permease component 2. | 0.490 |
LT85_3027 | LT85_3031 | LT85_3027 | LT85_3031 | Transcriptional regulator of various polyols utilization; AraC family. | Various polyols ABC transporter; Permease component 1. | 0.488 |
LT85_3027 | ugpC | LT85_3027 | LT85_3028 | Transcriptional regulator of various polyols utilization; AraC family. | Glycerol-3-phosphate ABC transporter; ATP-binding protein UgpC; Belongs to the ABC transporter superfamily. | 0.653 |
LT85_3027 | xylB-3 | LT85_3027 | LT85_3026 | Transcriptional regulator of various polyols utilization; AraC family. | Xylulose kinase. | 0.783 |
LT85_3029 | LT85_3027 | LT85_3029 | LT85_3027 | Xylitol dehydrogenase. | Transcriptional regulator of various polyols utilization; AraC family. | 0.705 |
LT85_3029 | LT85_3030 | LT85_3029 | LT85_3030 | Xylitol dehydrogenase. | Various polyols ABC transporter; Permease component 2. | 0.651 |
LT85_3029 | LT85_3031 | LT85_3029 | LT85_3031 | Xylitol dehydrogenase. | Various polyols ABC transporter; Permease component 1. | 0.650 |
LT85_3029 | LT85_3718 | LT85_3029 | LT85_3718 | Xylitol dehydrogenase. | D-arabinitol 4-dehydrogenase. | 0.927 |
LT85_3029 | ugpC | LT85_3029 | LT85_3028 | Xylitol dehydrogenase. | Glycerol-3-phosphate ABC transporter; ATP-binding protein UgpC; Belongs to the ABC transporter superfamily. | 0.791 |
LT85_3029 | xylA | LT85_3029 | LT85_1350 | Xylitol dehydrogenase. | Xylose isomerase; Belongs to the xylose isomerase family. | 0.914 |
LT85_3029 | xylB | LT85_3029 | LT85_1351 | Xylitol dehydrogenase. | Xylulose kinase. | 0.927 |
LT85_3029 | xylB-2 | LT85_3029 | LT85_1630 | Xylitol dehydrogenase. | Xylulose kinase. | 0.928 |
LT85_3029 | xylB-3 | LT85_3029 | LT85_3026 | Xylitol dehydrogenase. | Xylulose kinase. | 0.972 |
LT85_3029 | xylB-4 | LT85_3029 | LT85_3719 | Xylitol dehydrogenase. | Xylulose kinase. | 0.927 |
LT85_3030 | LT85_3027 | LT85_3030 | LT85_3027 | Various polyols ABC transporter; Permease component 2. | Transcriptional regulator of various polyols utilization; AraC family. | 0.490 |
LT85_3030 | LT85_3029 | LT85_3030 | LT85_3029 | Various polyols ABC transporter; Permease component 2. | Xylitol dehydrogenase. | 0.651 |
LT85_3030 | LT85_3031 | LT85_3030 | LT85_3031 | Various polyols ABC transporter; Permease component 2. | Various polyols ABC transporter; Permease component 1. | 0.978 |
LT85_3030 | ugpC | LT85_3030 | LT85_3028 | Various polyols ABC transporter; Permease component 2. | Glycerol-3-phosphate ABC transporter; ATP-binding protein UgpC; Belongs to the ABC transporter superfamily. | 0.959 |
LT85_3030 | xylB-3 | LT85_3030 | LT85_3026 | Various polyols ABC transporter; Permease component 2. | Xylulose kinase. | 0.480 |
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