Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LT85_0300 | LT85_0343 | LT85_0300 | LT85_0343 | DipZ protein. | Malonyl CoA-acyl carrier protein transacylase. | 0.744 |
LT85_0300 | LT85_0800 | LT85_0300 | LT85_0800 | DipZ protein. | Zinc transporter; ZIP family. | 0.659 |
LT85_0300 | LT85_1610 | LT85_0300 | LT85_1610 | DipZ protein. | Multicopper oxidase. | 0.457 |
LT85_0300 | LT85_1616 | LT85_0300 | LT85_1616 | DipZ protein. | Copper chaperone. | 0.532 |
LT85_0300 | LT85_3305 | LT85_0300 | LT85_3305 | DipZ protein. | Cytochrome c oxidase polypeptide II. | 0.833 |
LT85_0300 | LT85_3680 | LT85_0300 | LT85_3680 | DipZ protein. | Lead, cadmium, zinc and mercury transporting ATPase. | 0.519 |
LT85_0300 | czcD | LT85_0300 | LT85_2271 | DipZ protein. | Cobalt-zinc-cadmium resistance protein CzcD. | 0.547 |
LT85_0343 | LT85_0300 | LT85_0343 | LT85_0300 | Malonyl CoA-acyl carrier protein transacylase. | DipZ protein. | 0.744 |
LT85_0343 | LT85_1610 | LT85_0343 | LT85_1610 | Malonyl CoA-acyl carrier protein transacylase. | Multicopper oxidase. | 0.445 |
LT85_0343 | LT85_3305 | LT85_0343 | LT85_3305 | Malonyl CoA-acyl carrier protein transacylase. | Cytochrome c oxidase polypeptide II. | 0.673 |
LT85_0343 | LT85_3680 | LT85_0343 | LT85_3680 | Malonyl CoA-acyl carrier protein transacylase. | Lead, cadmium, zinc and mercury transporting ATPase. | 0.450 |
LT85_0800 | LT85_0300 | LT85_0800 | LT85_0300 | Zinc transporter; ZIP family. | DipZ protein. | 0.659 |
LT85_0800 | LT85_3680 | LT85_0800 | LT85_3680 | Zinc transporter; ZIP family. | Lead, cadmium, zinc and mercury transporting ATPase. | 0.451 |
LT85_0800 | czcD | LT85_0800 | LT85_2271 | Zinc transporter; ZIP family. | Cobalt-zinc-cadmium resistance protein CzcD. | 0.586 |
LT85_1609 | LT85_1610 | LT85_1609 | LT85_1610 | Copper tolerance protein. | Multicopper oxidase. | 0.975 |
LT85_1609 | LT85_3680 | LT85_1609 | LT85_3680 | Copper tolerance protein. | Lead, cadmium, zinc and mercury transporting ATPase. | 0.440 |
LT85_1610 | LT85_0300 | LT85_1610 | LT85_0300 | Multicopper oxidase. | DipZ protein. | 0.457 |
LT85_1610 | LT85_0343 | LT85_1610 | LT85_0343 | Multicopper oxidase. | Malonyl CoA-acyl carrier protein transacylase. | 0.445 |
LT85_1610 | LT85_1609 | LT85_1610 | LT85_1609 | Multicopper oxidase. | Copper tolerance protein. | 0.975 |
LT85_1610 | LT85_1616 | LT85_1610 | LT85_1616 | Multicopper oxidase. | Copper chaperone. | 0.625 |
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