Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LT85_4072 | LT85_4073 | LT85_4072 | LT85_4073 | Pyruvate dehydrogenase E1 component; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | Hypothetical protein. | 0.405 |
LT85_4073 | LT85_4072 | LT85_4073 | LT85_4072 | Hypothetical protein. | Pyruvate dehydrogenase E1 component; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.405 |
LT85_4073 | LT85_4074 | LT85_4073 | LT85_4074 | Hypothetical protein. | Excinuclease ATPase subunit. | 0.639 |
LT85_4073 | LT85_4076 | LT85_4073 | LT85_4076 | Hypothetical protein. | Transcriptional regulator; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily. | 0.431 |
LT85_4073 | plsY | LT85_4073 | LT85_4075 | Hypothetical protein. | Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP. | 0.512 |
LT85_4074 | LT85_4073 | LT85_4074 | LT85_4073 | Excinuclease ATPase subunit. | Hypothetical protein. | 0.639 |
LT85_4074 | LT85_4076 | LT85_4074 | LT85_4076 | Excinuclease ATPase subunit. | Transcriptional regulator; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily. | 0.510 |
LT85_4074 | plsY | LT85_4074 | LT85_4075 | Excinuclease ATPase subunit. | Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP. | 0.619 |
LT85_4076 | LT85_4073 | LT85_4076 | LT85_4073 | Transcriptional regulator; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily. | Hypothetical protein. | 0.431 |
LT85_4076 | LT85_4074 | LT85_4076 | LT85_4074 | Transcriptional regulator; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily. | Excinuclease ATPase subunit. | 0.510 |
LT85_4076 | plsY | LT85_4076 | LT85_4075 | Transcriptional regulator; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily. | Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP. | 0.679 |
plsY | LT85_4073 | LT85_4075 | LT85_4073 | Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP. | Hypothetical protein. | 0.512 |
plsY | LT85_4074 | LT85_4075 | LT85_4074 | Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP. | Excinuclease ATPase subunit. | 0.619 |
plsY | LT85_4076 | LT85_4075 | LT85_4076 | Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP. | Transcriptional regulator; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily. | 0.679 |