Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LT85_4321 | LT85_4322 | LT85_4321 | LT85_4322 | Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1. | Pyridoxamine 5'-phosphate oxidase. | 0.473 |
LT85_4321 | pdxH | LT85_4321 | LT85_4323 | Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1. | Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). | 0.526 |
LT85_4321 | thiF-2 | LT85_4321 | LT85_4621 | Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1. | Sulfur carrier protein adenylyltransferase ThiF. | 0.509 |
LT85_4321 | thiG | LT85_4321 | LT85_0788 | Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1. | Thiazole biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.455 |
LT85_4322 | LT85_4321 | LT85_4322 | LT85_4321 | Pyridoxamine 5'-phosphate oxidase. | Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1. | 0.473 |
LT85_4322 | pdxH | LT85_4322 | LT85_4323 | Pyridoxamine 5'-phosphate oxidase. | Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). | 0.910 |
pdxH | LT85_4321 | LT85_4323 | LT85_4321 | Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). | Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1. | 0.526 |
pdxH | LT85_4322 | LT85_4323 | LT85_4322 | Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). | Pyridoxamine 5'-phosphate oxidase. | 0.910 |
thiF-2 | LT85_4321 | LT85_4621 | LT85_4321 | Sulfur carrier protein adenylyltransferase ThiF. | Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1. | 0.509 |
thiF-2 | thiG | LT85_4621 | LT85_0788 | Sulfur carrier protein adenylyltransferase ThiF. | Thiazole biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.963 |
thiG | LT85_4321 | LT85_0788 | LT85_4321 | Thiazole biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1. | 0.455 |
thiG | thiF-2 | LT85_0788 | LT85_4621 | Thiazole biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | Sulfur carrier protein adenylyltransferase ThiF. | 0.963 |