Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LT85_0547 | LT85_4620 | LT85_0547 | LT85_4620 | Multimodular transpeptidase-transglycosylase. | Carboxyl-terminal protease; Belongs to the peptidase S41A family. | 0.433 |
LT85_0675 | LT85_2125 | LT85_0675 | LT85_2125 | TPR domain protein. | Hypothetical protein. | 0.585 |
LT85_0675 | LT85_2807 | LT85_0675 | LT85_2807 | TPR domain protein. | Hypothetical protein. | 0.585 |
LT85_0675 | LT85_4619 | LT85_0675 | LT85_4619 | TPR domain protein. | Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP. | 0.643 |
LT85_0675 | LT85_4620 | LT85_0675 | LT85_4620 | TPR domain protein. | Carboxyl-terminal protease; Belongs to the peptidase S41A family. | 0.419 |
LT85_2125 | LT85_0675 | LT85_2125 | LT85_0675 | Hypothetical protein. | TPR domain protein. | 0.585 |
LT85_2125 | LT85_2807 | LT85_2125 | LT85_2807 | Hypothetical protein. | Hypothetical protein. | 0.514 |
LT85_2125 | LT85_4619 | LT85_2125 | LT85_4619 | Hypothetical protein. | Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP. | 0.494 |
LT85_2125 | LT85_4620 | LT85_2125 | LT85_4620 | Hypothetical protein. | Carboxyl-terminal protease; Belongs to the peptidase S41A family. | 0.790 |
LT85_2125 | thiF-2 | LT85_2125 | LT85_4621 | Hypothetical protein. | Sulfur carrier protein adenylyltransferase ThiF. | 0.462 |
LT85_2807 | LT85_0675 | LT85_2807 | LT85_0675 | Hypothetical protein. | TPR domain protein. | 0.585 |
LT85_2807 | LT85_2125 | LT85_2807 | LT85_2125 | Hypothetical protein. | Hypothetical protein. | 0.514 |
LT85_2807 | LT85_4619 | LT85_2807 | LT85_4619 | Hypothetical protein. | Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP. | 0.494 |
LT85_2807 | LT85_4620 | LT85_2807 | LT85_4620 | Hypothetical protein. | Carboxyl-terminal protease; Belongs to the peptidase S41A family. | 0.790 |
LT85_2807 | thiF-2 | LT85_2807 | LT85_4621 | Hypothetical protein. | Sulfur carrier protein adenylyltransferase ThiF. | 0.462 |
LT85_4617 | LT85_4619 | LT85_4617 | LT85_4619 | Rhodanese-related sulfurtransferase. | Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP. | 0.436 |
LT85_4617 | LT85_4620 | LT85_4617 | LT85_4620 | Rhodanese-related sulfurtransferase. | Carboxyl-terminal protease; Belongs to the peptidase S41A family. | 0.443 |
LT85_4617 | gpmA | LT85_4617 | LT85_4618 | Rhodanese-related sulfurtransferase. | Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily. | 0.561 |
LT85_4617 | thiF-2 | LT85_4617 | LT85_4621 | Rhodanese-related sulfurtransferase. | Sulfur carrier protein adenylyltransferase ThiF. | 0.402 |
LT85_4619 | LT85_0675 | LT85_4619 | LT85_0675 | Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP. | TPR domain protein. | 0.643 |
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