Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LT85_3092 | LT85_4836 | LT85_3092 | LT85_4836 | Putative phosphatase YfbT. | Major facilitator superfamily MFS_1. | 0.409 |
LT85_3609 | LT85_4836 | LT85_3609 | LT85_4836 | L-fuconolactone hydrolase. | Major facilitator superfamily MFS_1. | 0.578 |
LT85_3609 | LT85_4918 | LT85_3609 | LT85_4918 | L-fuconolactone hydrolase. | L-fucose mutarotase; Type 2. | 0.865 |
LT85_4823 | LT85_4836 | LT85_4823 | LT85_4836 | Multidrug resistance transporter; Bcr/CflA family. | Major facilitator superfamily MFS_1. | 0.410 |
LT85_4836 | LT85_3092 | LT85_4836 | LT85_3092 | Major facilitator superfamily MFS_1. | Putative phosphatase YfbT. | 0.409 |
LT85_4836 | LT85_3609 | LT85_4836 | LT85_3609 | Major facilitator superfamily MFS_1. | L-fuconolactone hydrolase. | 0.578 |
LT85_4836 | LT85_4823 | LT85_4836 | LT85_4823 | Major facilitator superfamily MFS_1. | Multidrug resistance transporter; Bcr/CflA family. | 0.410 |
LT85_4836 | LT85_4837 | LT85_4836 | LT85_4837 | Major facilitator superfamily MFS_1. | Putative lipoprotein. | 0.651 |
LT85_4836 | LT85_4838 | LT85_4836 | LT85_4838 | Major facilitator superfamily MFS_1. | Beta-ketoadipate enol-lactone hydrolase. | 0.603 |
LT85_4836 | LT85_4918 | LT85_4836 | LT85_4918 | Major facilitator superfamily MFS_1. | L-fucose mutarotase; Type 2. | 0.792 |
LT85_4836 | hisC-2 | LT85_4836 | LT85_4835 | Major facilitator superfamily MFS_1. | Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.478 |
LT85_4836 | minE | LT85_4836 | LT85_4458 | Major facilitator superfamily MFS_1. | Cell division topological specificity factor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell. | 0.434 |
LT85_4836 | phoU | LT85_4836 | LT85_2087 | Major facilitator superfamily MFS_1. | Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake. | 0.434 |
LT85_4836 | yaeQ | LT85_4836 | LT85_4283 | Major facilitator superfamily MFS_1. | YaeQ protein. | 0.434 |
LT85_4837 | LT85_4836 | LT85_4837 | LT85_4836 | Putative lipoprotein. | Major facilitator superfamily MFS_1. | 0.651 |
LT85_4837 | LT85_4838 | LT85_4837 | LT85_4838 | Putative lipoprotein. | Beta-ketoadipate enol-lactone hydrolase. | 0.777 |
LT85_4838 | LT85_4836 | LT85_4838 | LT85_4836 | Beta-ketoadipate enol-lactone hydrolase. | Major facilitator superfamily MFS_1. | 0.603 |
LT85_4838 | LT85_4837 | LT85_4838 | LT85_4837 | Beta-ketoadipate enol-lactone hydrolase. | Putative lipoprotein. | 0.777 |
LT85_4918 | LT85_3609 | LT85_4918 | LT85_3609 | L-fucose mutarotase; Type 2. | L-fuconolactone hydrolase. | 0.865 |
LT85_4918 | LT85_4836 | LT85_4918 | LT85_4836 | L-fucose mutarotase; Type 2. | Major facilitator superfamily MFS_1. | 0.792 |
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