Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMP03298.1 | AMP05561.1 | CPter91_0910 | CPter91_3230 | RNB domain protein. | Putative primosomal replication protein n; Binds single-stranded DNA at the primosome assembly site (PAS). | 0.773 |
AMP03298.1 | ftsL | CPter91_0910 | CPter91_4921 | RNB domain protein. | Cell division protein FtsL; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. | 0.561 |
AMP03298.1 | lptA | CPter91_0910 | CPter91_0544 | RNB domain protein. | Lipopolysaccharide transport periplasmic protein LptA; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. | 0.729 |
AMP03298.1 | tolA | CPter91_0910 | CPter91_4160 | RNB domain protein. | Protein TolA. | 0.669 |
AMP03606.1 | ftsL | CPter91_1223 | CPter91_4921 | Hypothetical protein. | Cell division protein FtsL; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. | 0.700 |
AMP03606.1 | lptA | CPter91_1223 | CPter91_0544 | Hypothetical protein. | Lipopolysaccharide transport periplasmic protein LptA; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. | 0.723 |
AMP03606.1 | tolA | CPter91_1223 | CPter91_4160 | Hypothetical protein. | Protein TolA. | 0.686 |
AMP03606.1 | ygbF | CPter91_1223 | CPter91_4163 | Hypothetical protein. | Tol-pal system protein YbgF; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family. | 0.478 |
AMP05561.1 | AMP03298.1 | CPter91_3230 | CPter91_0910 | Putative primosomal replication protein n; Binds single-stranded DNA at the primosome assembly site (PAS). | RNB domain protein. | 0.773 |
AMP05561.1 | ftsL | CPter91_3230 | CPter91_4921 | Putative primosomal replication protein n; Binds single-stranded DNA at the primosome assembly site (PAS). | Cell division protein FtsL; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. | 0.503 |
AMP05561.1 | lptA | CPter91_3230 | CPter91_0544 | Putative primosomal replication protein n; Binds single-stranded DNA at the primosome assembly site (PAS). | Lipopolysaccharide transport periplasmic protein LptA; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. | 0.717 |
AMP05561.1 | tolA | CPter91_3230 | CPter91_4160 | Putative primosomal replication protein n; Binds single-stranded DNA at the primosome assembly site (PAS). | Protein TolA. | 0.601 |
AMP06475.1 | pal | CPter91_4159 | CPter91_4162 | Biopolymer transport ExbD/TolR family protein. | Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.854 |
AMP06475.1 | tolA | CPter91_4159 | CPter91_4160 | Biopolymer transport ExbD/TolR family protein. | Protein TolA. | 0.793 |
AMP06475.1 | tolB | CPter91_4159 | CPter91_4161 | Biopolymer transport ExbD/TolR family protein. | tol-Pal system beta propeller repeat protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.886 |
AMP06475.1 | tolQ | CPter91_4159 | CPter91_4158 | Biopolymer transport ExbD/TolR family protein. | Protein TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.955 |
AMP06475.1 | ygbF | CPter91_4159 | CPter91_4163 | Biopolymer transport ExbD/TolR family protein. | Tol-pal system protein YbgF; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family. | 0.757 |
ftsL | AMP03298.1 | CPter91_4921 | CPter91_0910 | Cell division protein FtsL; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. | RNB domain protein. | 0.561 |
ftsL | AMP03606.1 | CPter91_4921 | CPter91_1223 | Cell division protein FtsL; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. | Hypothetical protein. | 0.700 |
ftsL | AMP05561.1 | CPter91_4921 | CPter91_3230 | Cell division protein FtsL; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. | Putative primosomal replication protein n; Binds single-stranded DNA at the primosome assembly site (PAS). | 0.503 |
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