STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saro_0101Myo-inositol-1-phosphate synthase. (366 aa)    
Predicted Functional Partners:
Saro_0102
Nucleotidyl transferase.
  
 0.976
Saro_0100
CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
  
 0.969
Saro_1655
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I.
     
 0.912
Saro_0975
Inositol monophosphatase.
  
 
 0.909
Saro_1957
Inositol-1(or 4)-monophosphatase.
  
 
 0.909
Saro_3171
Inositol monophosphatase.
  
 
 0.909
glk
Glucokinase; Belongs to the bacterial glucokinase family.
     
  0.900
Saro_0099
CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
     0.609
Saro_1995
Inositol monophosphatase.
  
 
 0.547
Your Current Organism:
Novosphingobium aromaticivorans
NCBI taxonomy Id: 279238
Other names: N. aromaticivorans DSM 12444, Novosphingobium aromaticivorans DSM 12444, Novosphingobium aromaticivorans str. DSM 12444, Novosphingobium aromaticivorans strain DSM 12444
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