Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Saro_0394 | Saro_0395 | Saro_0394 | Saro_0395 | Conserved hypothetical protein. | Kef-type potassium/proton antiporter, CPA2 family; TC 2.A.37.1; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | 0.773 |
Saro_0394 | Saro_0396 | Saro_0394 | Saro_0396 | Conserved hypothetical protein. | UspA. | 0.746 |
Saro_0394 | Saro_0397 | Saro_0394 | Saro_0397 | Conserved hypothetical protein. | Cation transporter. | 0.545 |
Saro_0394 | Saro_0398 | Saro_0394 | Saro_0398 | Conserved hypothetical protein. | TrkA-N. | 0.546 |
Saro_0395 | Saro_0394 | Saro_0395 | Saro_0394 | Kef-type potassium/proton antiporter, CPA2 family; TC 2.A.37.1; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | Conserved hypothetical protein. | 0.773 |
Saro_0395 | Saro_0396 | Saro_0395 | Saro_0396 | Kef-type potassium/proton antiporter, CPA2 family; TC 2.A.37.1; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | UspA. | 0.766 |
Saro_0395 | Saro_0397 | Saro_0395 | Saro_0397 | Kef-type potassium/proton antiporter, CPA2 family; TC 2.A.37.1; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | Cation transporter. | 0.736 |
Saro_0395 | Saro_0398 | Saro_0395 | Saro_0398 | Kef-type potassium/proton antiporter, CPA2 family; TC 2.A.37.1; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | TrkA-N. | 0.667 |
Saro_0395 | guaB | Saro_0395 | Saro_1752 | Kef-type potassium/proton antiporter, CPA2 family; TC 2.A.37.1; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.522 |
Saro_0396 | Saro_0394 | Saro_0396 | Saro_0394 | UspA. | Conserved hypothetical protein. | 0.746 |
Saro_0396 | Saro_0395 | Saro_0396 | Saro_0395 | UspA. | Kef-type potassium/proton antiporter, CPA2 family; TC 2.A.37.1; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | 0.766 |
Saro_0396 | Saro_0397 | Saro_0396 | Saro_0397 | UspA. | Cation transporter. | 0.563 |
Saro_0396 | Saro_0398 | Saro_0396 | Saro_0398 | UspA. | TrkA-N. | 0.627 |
Saro_0397 | Saro_0394 | Saro_0397 | Saro_0394 | Cation transporter. | Conserved hypothetical protein. | 0.545 |
Saro_0397 | Saro_0395 | Saro_0397 | Saro_0395 | Cation transporter. | Kef-type potassium/proton antiporter, CPA2 family; TC 2.A.37.1; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | 0.736 |
Saro_0397 | Saro_0396 | Saro_0397 | Saro_0396 | Cation transporter. | UspA. | 0.563 |
Saro_0397 | Saro_0398 | Saro_0397 | Saro_0398 | Cation transporter. | TrkA-N. | 0.988 |
Saro_0397 | guaB | Saro_0397 | Saro_1752 | Cation transporter. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.468 |
Saro_0398 | Saro_0394 | Saro_0398 | Saro_0394 | TrkA-N. | Conserved hypothetical protein. | 0.546 |
Saro_0398 | Saro_0395 | Saro_0398 | Saro_0395 | TrkA-N. | Kef-type potassium/proton antiporter, CPA2 family; TC 2.A.37.1; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | 0.667 |
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