STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saro_0509Ferredoxin. (110 aa)    
Predicted Functional Partners:
Saro_0510
Cyclohexanone monooxygenase.
     
 0.677
Saro_1954
Conserved hypothetical protein.
  
 0.671
Saro_0201
HesB/YadR/YfhF; Belongs to the HesB/IscA family.
 
 
 0.610
Saro_0216
FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
 
  
 0.548
Saro_0514
Cytochrome P450.
 
 0.542
Saro_2797
Aminotransferase, class V.
  
 0.504
Saro_2798
Aminotransferase, class V.
  
 0.504
nuoI
NADH dehydrogenase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
 
 0.498
Saro_0220
Cytochrome P450.
 
 0.496
Saro_0512
Short-chain dehydrogenase/reductase SDR.
  
 
 0.491
Your Current Organism:
Novosphingobium aromaticivorans
NCBI taxonomy Id: 279238
Other names: N. aromaticivorans DSM 12444, Novosphingobium aromaticivorans DSM 12444, Novosphingobium aromaticivorans str. DSM 12444, Novosphingobium aromaticivorans strain DSM 12444
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