STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saro_0626Hypothetical protein. (357 aa)    
Predicted Functional Partners:
Saro_0609
Transcriptional regulator, CopG family; Transcriptional regulator.
  
 
 0.813
Saro_0627
Hypothetical protein.
       0.773
Saro_0620
MT-A70 protein; Belongs to the MT-A70-like family.
       0.740
Saro_0617
Phage integrase; Belongs to the 'phage' integrase family.
     
 0.727
Saro_0625
ParB-like nuclease.
  
    0.723
Saro_0618
Hypothetical protein.
       0.718
Saro_0619
Hypothetical protein.
       0.718
Saro_0621
Hypothetical protein.
       0.718
Saro_0622
Conserved hypothetical protein.
       0.718
Saro_0623
Hypothetical protein.
       0.718
Your Current Organism:
Novosphingobium aromaticivorans
NCBI taxonomy Id: 279238
Other names: N. aromaticivorans DSM 12444, Novosphingobium aromaticivorans DSM 12444, Novosphingobium aromaticivorans str. DSM 12444, Novosphingobium aromaticivorans strain DSM 12444
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.