Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Saro_0177 | Saro_0566 | Saro_0177 | Saro_0566 | hydroxymethylglutaryl-CoA lyase. | butyryl-CoA:acetate CoA transferase. | 0.937 |
Saro_0177 | Saro_0568 | Saro_0177 | Saro_0568 | hydroxymethylglutaryl-CoA lyase. | 3-oxoacid CoA-transferase, subunit A. | 0.935 |
Saro_0177 | Saro_0809 | Saro_0177 | Saro_0809 | hydroxymethylglutaryl-CoA lyase. | Acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.924 |
Saro_0177 | Saro_1757 | Saro_0177 | Saro_1757 | hydroxymethylglutaryl-CoA lyase. | Pyruvate flavodoxin/ferredoxin oxidoreductase-like protein. | 0.945 |
Saro_0177 | Saro_2032 | Saro_0177 | Saro_2032 | hydroxymethylglutaryl-CoA lyase. | Citrate synthase; Belongs to the citrate synthase family. | 0.836 |
Saro_0554 | Saro_0566 | Saro_0554 | Saro_0566 | 3-hydroxyacyl-CoA dehydrogenase. | butyryl-CoA:acetate CoA transferase. | 0.923 |
Saro_0554 | Saro_0568 | Saro_0554 | Saro_0568 | 3-hydroxyacyl-CoA dehydrogenase. | 3-oxoacid CoA-transferase, subunit A. | 0.921 |
Saro_0554 | Saro_0809 | Saro_0554 | Saro_0809 | 3-hydroxyacyl-CoA dehydrogenase. | Acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.981 |
Saro_0566 | Saro_0177 | Saro_0566 | Saro_0177 | butyryl-CoA:acetate CoA transferase. | hydroxymethylglutaryl-CoA lyase. | 0.937 |
Saro_0566 | Saro_0554 | Saro_0566 | Saro_0554 | butyryl-CoA:acetate CoA transferase. | 3-hydroxyacyl-CoA dehydrogenase. | 0.923 |
Saro_0566 | Saro_0568 | Saro_0566 | Saro_0568 | butyryl-CoA:acetate CoA transferase. | 3-oxoacid CoA-transferase, subunit A. | 0.999 |
Saro_0566 | Saro_0809 | Saro_0566 | Saro_0809 | butyryl-CoA:acetate CoA transferase. | Acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.928 |
Saro_0566 | Saro_0869 | Saro_0566 | Saro_0869 | butyryl-CoA:acetate CoA transferase. | 3-hydroxyacyl-CoA dehydrogenase. | 0.611 |
Saro_0568 | Saro_0177 | Saro_0568 | Saro_0177 | 3-oxoacid CoA-transferase, subunit A. | hydroxymethylglutaryl-CoA lyase. | 0.935 |
Saro_0568 | Saro_0554 | Saro_0568 | Saro_0554 | 3-oxoacid CoA-transferase, subunit A. | 3-hydroxyacyl-CoA dehydrogenase. | 0.921 |
Saro_0568 | Saro_0566 | Saro_0568 | Saro_0566 | 3-oxoacid CoA-transferase, subunit A. | butyryl-CoA:acetate CoA transferase. | 0.999 |
Saro_0568 | Saro_0809 | Saro_0568 | Saro_0809 | 3-oxoacid CoA-transferase, subunit A. | Acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.920 |
Saro_0568 | Saro_0869 | Saro_0568 | Saro_0869 | 3-oxoacid CoA-transferase, subunit A. | 3-hydroxyacyl-CoA dehydrogenase. | 0.589 |
Saro_0809 | Saro_0177 | Saro_0809 | Saro_0177 | Acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | hydroxymethylglutaryl-CoA lyase. | 0.924 |
Saro_0809 | Saro_0554 | Saro_0809 | Saro_0554 | Acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 3-hydroxyacyl-CoA dehydrogenase. | 0.981 |
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