Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Saro_0336 | Saro_1188 | Saro_0336 | Saro_1188 | precorrin-6Y C5,15-methyltransferase (decarboxylating). | Transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.503 |
Saro_0336 | Saro_1189 | Saro_0336 | Saro_1189 | precorrin-6Y C5,15-methyltransferase (decarboxylating). | ABC transporter related protein. | 0.510 |
Saro_0336 | cobS | Saro_0336 | Saro_0326 | precorrin-6Y C5,15-methyltransferase (decarboxylating). | Cobalamin-5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. | 0.872 |
Saro_1186 | Saro_1187 | Saro_1186 | Saro_1187 | TonB-dependent receptor. | Periplasmic binding protein. | 0.932 |
Saro_1186 | Saro_1188 | Saro_1186 | Saro_1188 | TonB-dependent receptor. | Transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.917 |
Saro_1186 | Saro_1189 | Saro_1186 | Saro_1189 | TonB-dependent receptor. | ABC transporter related protein. | 0.812 |
Saro_1187 | Saro_1186 | Saro_1187 | Saro_1186 | Periplasmic binding protein. | TonB-dependent receptor. | 0.932 |
Saro_1187 | Saro_1188 | Saro_1187 | Saro_1188 | Periplasmic binding protein. | Transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.996 |
Saro_1187 | Saro_1189 | Saro_1187 | Saro_1189 | Periplasmic binding protein. | ABC transporter related protein. | 0.971 |
Saro_1188 | Saro_0336 | Saro_1188 | Saro_0336 | Transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | precorrin-6Y C5,15-methyltransferase (decarboxylating). | 0.503 |
Saro_1188 | Saro_1186 | Saro_1188 | Saro_1186 | Transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | TonB-dependent receptor. | 0.917 |
Saro_1188 | Saro_1187 | Saro_1188 | Saro_1187 | Transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | Periplasmic binding protein. | 0.996 |
Saro_1188 | Saro_1189 | Saro_1188 | Saro_1189 | Transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | ABC transporter related protein. | 0.999 |
Saro_1188 | Saro_1191 | Saro_1188 | Saro_1191 | Transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | Hypothetical protein. | 0.405 |
Saro_1188 | Saro_3280 | Saro_1188 | Saro_3280 | Transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | TonB-dependent siderophore receptor. | 0.422 |
Saro_1188 | cobS | Saro_1188 | Saro_0326 | Transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | Cobalamin-5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. | 0.418 |
Saro_1189 | Saro_0336 | Saro_1189 | Saro_0336 | ABC transporter related protein. | precorrin-6Y C5,15-methyltransferase (decarboxylating). | 0.510 |
Saro_1189 | Saro_1186 | Saro_1189 | Saro_1186 | ABC transporter related protein. | TonB-dependent receptor. | 0.812 |
Saro_1189 | Saro_1187 | Saro_1189 | Saro_1187 | ABC transporter related protein. | Periplasmic binding protein. | 0.971 |
Saro_1189 | Saro_1188 | Saro_1189 | Saro_1188 | ABC transporter related protein. | Transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.999 |
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