Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Saro_1237Putative signal transduction histidine kinase. (547 aa)    
Predicted Functional Partners:
Saro_1236
Two component transcriptional regulator, LuxR family.
 
 
 0.971
Saro_1627
Two component transcriptional regulator, LuxR family.
 
 
 0.888
Saro_2626
Two component transcriptional regulator, LuxR family.
 
 
 0.870
Saro_1235
Hypothetical protein.
       0.548
Saro_0036
Histidine kinase.
  
 
 0.537
Saro_1231
Transcriptional regulator, LuxR family.
  
 
 0.537
Saro_0489
Response regulator receiver domain protein (CheY-like).
  
 
 0.522
Saro_2627
Multi-sensor hybrid histidine kinase.
  
 
 0.493
Saro_1238
Transcriptional regulator, LuxR family.
     
 0.480
Saro_2971
Protein serine/threonine phosphatase.
  
  
 0.455
Your Current Organism:
Novosphingobium aromaticivorans
NCBI taxonomy Id: 279238
Other names: N. aromaticivorans DSM 12444, Novosphingobium aromaticivorans DSM 12444, Novosphingobium aromaticivorans str. DSM 12444, Novosphingobium aromaticivorans strain DSM 12444
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.