STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saro_1705acyl-CoA dehydrogenase-like protein. (393 aa)    
Predicted Functional Partners:
Saro_1706
Aminoglycoside phosphotransferase.
 
 0.989
Saro_0994
Aminoglycoside phosphotransferase.
 
 0.944
Saro_1643
Propionyl-CoA carboxylase.
 
 
 0.922
Saro_1642
Carbamoyl-phosphate synthase L chain, ATP-binding protein.
  
 0.913
Saro_1974
Branched-chain alpha-keto acid dehydrogenase E2 component.
   
 0.913
Saro_1417
Short chain enoyl-CoA hydratase.
  
 0.889
Saro_0859
Enoyl-CoA hydratase/isomerase.
  
 0.887
Saro_0518
Enoyl-CoA hydratase/isomerase.
  
 0.886
Saro_1283
Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.886
Saro_1897
Enoyl-CoA hydratase.
 
 0.842
Your Current Organism:
Novosphingobium aromaticivorans
NCBI taxonomy Id: 279238
Other names: N. aromaticivorans DSM 12444, Novosphingobium aromaticivorans DSM 12444, Novosphingobium aromaticivorans str. DSM 12444, Novosphingobium aromaticivorans strain DSM 12444
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