Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Saro_0039 | Saro_2147 | Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.675 |
Saro_2145 | Saro_2146 | Heavy metal translocating P-type ATPase. | Heavy metal efflux pump CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.699 |
Saro_2145 | Saro_2147 | Heavy metal translocating P-type ATPase. | Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.683 |
Saro_2145 | Saro_2148 | Heavy metal translocating P-type ATPase. | Outer membrane efflux protein. | 0.717 |
Saro_2146 | Saro_2145 | Heavy metal efflux pump CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Heavy metal translocating P-type ATPase. | 0.699 |
Saro_2146 | Saro_2147 | Heavy metal efflux pump CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.980 |
Saro_2146 | Saro_2148 | Heavy metal efflux pump CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Outer membrane efflux protein. | 0.970 |
Saro_2147 | Saro_0039 | Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.675 |
Saro_2147 | Saro_2145 | Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Heavy metal translocating P-type ATPase. | 0.683 |
Saro_2147 | Saro_2146 | Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Heavy metal efflux pump CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.980 |
Saro_2147 | Saro_2148 | Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Outer membrane efflux protein. | 0.976 |
Saro_2147 | Saro_2159 | Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | TraB pilus assembly. | 0.664 |
Saro_2147 | Saro_2160 | Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Hypothetical protein; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily. | 0.654 |
Saro_2147 | Saro_2167 | Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Hypothetical protein. | 0.657 |
Saro_2147 | Saro_2168 | Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | TraH. | 0.644 |
Saro_2147 | Saro_2169 | Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | TraG-like protein. | 0.679 |
Saro_2147 | Saro_2184 | Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Type IV secretory pathway VirD4 components-like protein. | 0.619 |
Saro_2148 | Saro_2145 | Outer membrane efflux protein. | Heavy metal translocating P-type ATPase. | 0.717 |
Saro_2148 | Saro_2146 | Outer membrane efflux protein. | Heavy metal efflux pump CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.970 |
Saro_2148 | Saro_2147 | Outer membrane efflux protein. | Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.976 |
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