Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Saro_0428 | Saro_2347 | Twin-arginine translocation pathway signal. | Phenylacetic acid degradation-related protein. | 0.414 |
Saro_1647 | Saro_2347 | Twin-arginine translocation pathway signal. | Phenylacetic acid degradation-related protein. | 0.440 |
Saro_2345 | Saro_2346 | Response regulator receiver domain protein (CheY-like). | Signal transduction histidine kinase. | 0.860 |
Saro_2345 | Saro_2347 | Response regulator receiver domain protein (CheY-like). | Phenylacetic acid degradation-related protein. | 0.568 |
Saro_2345 | Saro_2348 | Response regulator receiver domain protein (CheY-like). | Peptidase M20D, amidohydrolase. | 0.568 |
Saro_2345 | Saro_2349 | Response regulator receiver domain protein (CheY-like). | Acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.401 |
Saro_2346 | Saro_2345 | Signal transduction histidine kinase. | Response regulator receiver domain protein (CheY-like). | 0.860 |
Saro_2346 | Saro_2347 | Signal transduction histidine kinase. | Phenylacetic acid degradation-related protein. | 0.606 |
Saro_2346 | Saro_2348 | Signal transduction histidine kinase. | Peptidase M20D, amidohydrolase. | 0.568 |
Saro_2346 | Saro_2349 | Signal transduction histidine kinase. | Acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.411 |
Saro_2347 | Saro_0428 | Phenylacetic acid degradation-related protein. | Twin-arginine translocation pathway signal. | 0.414 |
Saro_2347 | Saro_1647 | Phenylacetic acid degradation-related protein. | Twin-arginine translocation pathway signal. | 0.440 |
Saro_2347 | Saro_2345 | Phenylacetic acid degradation-related protein. | Response regulator receiver domain protein (CheY-like). | 0.568 |
Saro_2347 | Saro_2346 | Phenylacetic acid degradation-related protein. | Signal transduction histidine kinase. | 0.606 |
Saro_2347 | Saro_2348 | Phenylacetic acid degradation-related protein. | Peptidase M20D, amidohydrolase. | 0.780 |
Saro_2347 | Saro_2349 | Phenylacetic acid degradation-related protein. | Acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.542 |
Saro_2348 | Saro_2345 | Peptidase M20D, amidohydrolase. | Response regulator receiver domain protein (CheY-like). | 0.568 |
Saro_2348 | Saro_2346 | Peptidase M20D, amidohydrolase. | Signal transduction histidine kinase. | 0.568 |
Saro_2348 | Saro_2347 | Peptidase M20D, amidohydrolase. | Phenylacetic acid degradation-related protein. | 0.780 |
Saro_2348 | Saro_2349 | Peptidase M20D, amidohydrolase. | Acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.527 |
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