STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saro_2413PTS system IIA component, Glc family / Phosphocarrier protein HPr; TC 4.A.1. (836 aa)    
Predicted Functional Partners:
Saro_2412
N-acetylglucosamine PTS system EIICBA or EIICB component; TC 4.A.1.1.2; TC 4.A.1.1.2.
 
 0.999
Saro_2902
HPrNtr.
 
 0.999
tuf
Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
  
 0.965
Saro_0111
PTS IIA-like nitrogen-regulatory protein PtsN.
 
  
 0.932
Saro_2417
beta-N-acetylhexosaminidase.
  
  
 0.914
Saro_2414
N-acetylglucosamine 6-phosphate deacetylase.
 
   
 0.905
Saro_2416
Transcriptional regulator, GntR family.
 
   
 0.883
Saro_2903
PTS system fructose subfamily IIA component.
 
 
 0.883
Saro_0755
Transcriptional regulator, LacI family.
   
 
 0.821
Saro_1320
Transcriptional regulator, LacI family.
   
 
 0.821
Your Current Organism:
Novosphingobium aromaticivorans
NCBI taxonomy Id: 279238
Other names: N. aromaticivorans DSM 12444, Novosphingobium aromaticivorans DSM 12444, Novosphingobium aromaticivorans str. DSM 12444, Novosphingobium aromaticivorans strain DSM 12444
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.