STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saro_2453AMP-dependent synthetase and ligase. (544 aa)    
Predicted Functional Partners:
Saro_1531
AMP-dependent synthetase and ligase.
 
     0.765
Saro_2454
Transcriptional regulator, TetR family.
 
     0.716
Saro_2455
Iron-containing alcohol dehydrogenase.
 
   
 0.702
Saro_0821
AMP-dependent synthetase and ligase.
 
    
0.687
Saro_2452
Cyclohexanone monooxygenase.
 
  
 0.638
Saro_1897
Enoyl-CoA hydratase.
 
   0.619
Saro_2451
Cytochrome P450.
 
 0.591
Saro_0869
3-hydroxyacyl-CoA dehydrogenase.
 
 
 0.485
Saro_2450
Alcohol dehydrogenase superfamily, zinc-containing.
     
 0.461
acsA
Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 
0.459
Your Current Organism:
Novosphingobium aromaticivorans
NCBI taxonomy Id: 279238
Other names: N. aromaticivorans DSM 12444, Novosphingobium aromaticivorans DSM 12444, Novosphingobium aromaticivorans str. DSM 12444, Novosphingobium aromaticivorans strain DSM 12444
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