STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saro_2571Cytochrome oxidase maturation protein, cbb3-type. (49 aa)    
Predicted Functional Partners:
Saro_2573
Integral membrane protein linked to a cation pump-like protein.
 
  
 0.949
Saro_2575
Cytochrome c oxidase, cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
  
 0.932
Saro_2574
4Fe-4S ferredoxin, iron-sulfur binding protein.
 
  
 0.929
Saro_2577
Cytochrome c oxidase, cbb3-type, subunit II.
 
  
 0.916
Saro_2572
Heavy metal translocating P-type ATPase.
 
  
 0.905
Saro_2578
Cytochrome c oxidase, cbb3-type, subunit I; Belongs to the heme-copper respiratory oxidase family.
 
   
 0.872
Saro_2576
Cbb3-type cytochrome oxidase component.
  
  
 0.847
Saro_2569
Oxygen-independent coproporphyrinogen III oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
  
    0.800
Saro_2570
Hypothetical protein.
       0.773
Saro_2568
2-keto-3-deoxy-phosphogluconate aldolase.
       0.507
Your Current Organism:
Novosphingobium aromaticivorans
NCBI taxonomy Id: 279238
Other names: N. aromaticivorans DSM 12444, Novosphingobium aromaticivorans DSM 12444, Novosphingobium aromaticivorans str. DSM 12444, Novosphingobium aromaticivorans strain DSM 12444
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