STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saro_2907Two component transcriptional regulator, winged helix family. (250 aa)    
Predicted Functional Partners:
Saro_2906
Periplasmic sensor signal transduction histidine kinase.
 0.996
Saro_2275
Histidine kinase.
 
 0.853
Saro_1632
Periplasmic sensor signal transduction histidine kinase.
 
 0.840
Saro_1774
Periplasmic sensor signal transduction histidine kinase.
 
 0.834
Saro_0036
Histidine kinase.
 
 0.828
Saro_0442
Periplasmic sensor signal transduction histidine kinase.
 
 0.818
Saro_2618
Periplasmic sensor signal transduction histidine kinase.
 
 0.817
Saro_1600
Periplasmic sensor signal transduction histidine kinase.
 
 
 0.815
Saro_0387
Periplasmic sensor signal transduction histidine kinase.
 
 0.803
Saro_2905
Hpr(Ser) kinase/phosphatase.
       0.783
Your Current Organism:
Novosphingobium aromaticivorans
NCBI taxonomy Id: 279238
Other names: N. aromaticivorans DSM 12444, Novosphingobium aromaticivorans DSM 12444, Novosphingobium aromaticivorans str. DSM 12444, Novosphingobium aromaticivorans strain DSM 12444
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.