Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Saro_1576 | Saro_2924 | Alternative oxidase. | Copper resistance D. | 0.556 |
Saro_2140 | Saro_2924 | Copper resistance protein CopC. | Copper resistance D. | 0.817 |
Saro_2397 | Saro_2924 | Conserved hypothetical protein. | Copper resistance D. | 0.518 |
Saro_2922 | Saro_2923 | Carboxylesterase; Serine hydrolase involved in the detoxification of formaldehyde. | Glyoxalase/bleomycin resistance protein/dioxygenase. | 0.836 |
Saro_2922 | Saro_2924 | Carboxylesterase; Serine hydrolase involved in the detoxification of formaldehyde. | Copper resistance D. | 0.528 |
Saro_2922 | Saro_2925 | Carboxylesterase; Serine hydrolase involved in the detoxification of formaldehyde. | Copper resistance protein CopC. | 0.497 |
Saro_2923 | Saro_2922 | Glyoxalase/bleomycin resistance protein/dioxygenase. | Carboxylesterase; Serine hydrolase involved in the detoxification of formaldehyde. | 0.836 |
Saro_2923 | Saro_2924 | Glyoxalase/bleomycin resistance protein/dioxygenase. | Copper resistance D. | 0.611 |
Saro_2923 | Saro_2925 | Glyoxalase/bleomycin resistance protein/dioxygenase. | Copper resistance protein CopC. | 0.497 |
Saro_2924 | Saro_1576 | Copper resistance D. | Alternative oxidase. | 0.556 |
Saro_2924 | Saro_2140 | Copper resistance D. | Copper resistance protein CopC. | 0.817 |
Saro_2924 | Saro_2397 | Copper resistance D. | Conserved hypothetical protein. | 0.518 |
Saro_2924 | Saro_2922 | Copper resistance D. | Carboxylesterase; Serine hydrolase involved in the detoxification of formaldehyde. | 0.528 |
Saro_2924 | Saro_2923 | Copper resistance D. | Glyoxalase/bleomycin resistance protein/dioxygenase. | 0.611 |
Saro_2924 | Saro_2925 | Copper resistance D. | Copper resistance protein CopC. | 0.946 |
Saro_2924 | Saro_2926 | Copper resistance D. | Hypothetical protein. | 0.505 |
Saro_2924 | Saro_2927 | Copper resistance D. | Hypothetical protein. | 0.526 |
Saro_2924 | Saro_2929 | Copper resistance D. | Copper-resistance protein CopA. | 0.603 |
Saro_2924 | Saro_2930 | Copper resistance D. | Copper resistance B precursor. | 0.634 |
Saro_2925 | Saro_2922 | Copper resistance protein CopC. | Carboxylesterase; Serine hydrolase involved in the detoxification of formaldehyde. | 0.497 |
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