STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saro_2929Copper-resistance protein CopA. (594 aa)    
Predicted Functional Partners:
Saro_2930
Copper resistance B precursor.
  
 0.976
Saro_2931
Uncharacterized protein involved in copper resistance-like protein.
 
  
 0.948
Saro_2135
Copper resistance B precursor.
  
 0.905
Saro_2142
Heavy metal translocating P-type ATPase.
 
  
 0.766
Saro_2927
Hypothetical protein.
     
 0.704
Saro_2928
Sigma-24 (FecI-like); Belongs to the sigma-70 factor family. ECF subfamily.
     
 0.697
Saro_2926
Hypothetical protein.
       0.686
Saro_2924
Copper resistance D.
 
   
 0.603
Saro_2925
Copper resistance protein CopC.
     
 0.523
Saro_2145
Heavy metal translocating P-type ATPase.
 
  
 0.466
Your Current Organism:
Novosphingobium aromaticivorans
NCBI taxonomy Id: 279238
Other names: N. aromaticivorans DSM 12444, Novosphingobium aromaticivorans DSM 12444, Novosphingobium aromaticivorans str. DSM 12444, Novosphingobium aromaticivorans strain DSM 12444
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.