STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900176565_00175Unannotated protein. (342 aa)    
Predicted Functional Partners:
GCA_900176565_00173
Unannotated protein.
 0.999
GCA_900176565_00174
Unannotated protein.
 0.999
GCA_900176565_01450
Unannotated protein.
   
 
 0.959
GCA_900176565_00274
Unannotated protein.
 
 
  0.926
GCA_900176565_03114
Unannotated protein.
 
 
  0.920
GCA_900176565_02241
Unannotated protein.
 
   
 
0.901
GCA_900176565_01663
Unannotated protein.
 
  
 0.890
GCA_900176565_01555
Unannotated protein.
 
 
 
  0.880
GCA_900176565_03303
Unannotated protein.
 
 
  0.858
GCA_900176565_03630
Unannotated protein.
    
   0.829
Your Current Organism:
Thalassobacillus devorans
NCBI taxonomy Id: 279813
Other names: CCM 7282, CECT 7046, DSM 16966, Halobacillus degradans, T. devorans, Thalassobacillus devorans Garcia et al. 2005, strain G-19.1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.