STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900176565_00280Unannotated protein. (321 aa)    
Predicted Functional Partners:
GCA_900176565_00281
Unannotated protein.
  
  
 0.948
GCA_900176565_00282
Unannotated protein.
  
 0.899
GCA_900176565_03130
Unannotated protein.
  
  
 0.734
GCA_900176565_03766
Unannotated protein.
  
     0.680
GCA_900176565_03096
Unannotated protein.
 
   
 0.679
GCA_900176565_03612
Unannotated protein.
  
     0.673
GCA_900176565_03695
Unannotated protein.
  
     0.657
GCA_900176565_00279
Unannotated protein.
  
  
 0.643
GCA_900176565_03191
Unannotated protein.
  
     0.633
GCA_900176565_03101
Unannotated protein.
  
     0.618
Your Current Organism:
Thalassobacillus devorans
NCBI taxonomy Id: 279813
Other names: CCM 7282, CECT 7046, DSM 16966, Halobacillus degradans, T. devorans, Thalassobacillus devorans Garcia et al. 2005, strain G-19.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.