STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900176565_02292Unannotated protein. (763 aa)    
Predicted Functional Partners:
GCA_900176565_04085
Unannotated protein.
 
 0.990
GCA_900176565_02290
Unannotated protein.
 
 
 0.800
GCA_900176565_02286
Unannotated protein.
 
 
 0.788
GCA_900176565_00485
Unannotated protein.
  
 
 0.769
GCA_900176565_02287
Unannotated protein.
  
  
 0.740
GCA_900176565_02289
Unannotated protein.
  
  
 0.635
GCA_900176565_01446
Unannotated protein.
 
 
 0.610
GCA_900176565_02291
Unannotated protein.
       0.576
GCA_900176565_01441
Unannotated protein.
  
 
 0.555
GCA_900176565_00876
Unannotated protein.
  
 
 0.517
Your Current Organism:
Thalassobacillus devorans
NCBI taxonomy Id: 279813
Other names: CCM 7282, CECT 7046, DSM 16966, Halobacillus degradans, T. devorans, Thalassobacillus devorans Garcia et al. 2005, strain G-19.1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.